diff options
Diffstat (limited to 'structure/metrics/overlap_degree.py')
-rw-r--r-- | structure/metrics/overlap_degree.py | 47 |
1 files changed, 47 insertions, 0 deletions
diff --git a/structure/metrics/overlap_degree.py b/structure/metrics/overlap_degree.py new file mode 100644 index 0000000..fa69434 --- /dev/null +++ b/structure/metrics/overlap_degree.py @@ -0,0 +1,47 @@ +#### +## +## Compute the overlapping degree for each node and the corresponding +## z-score +## +## + +import sys +import numpy + + +if len(sys.argv) < 2: + print "Usage: %s <layer1> <layer2> [<layer3>...]" % sys.argv[0] + sys.exit(1) + + +nodes = {} + +for f in sys.argv[1:]: + + lines = open(f).readlines() + + for l in lines: + if l[0] == "#": + continue + s,d = [int(x) for x in l.strip(" \n").split(" ")] + if nodes.has_key(s): + nodes[s] +=1 + else: + nodes[s] = 1 + if nodes.has_key(d): + nodes[d] +=1 + else: + nodes[d] = 1 + + +degrees = nodes.values() +avg_deg = numpy.mean(degrees) +std_deg = numpy.std(degrees) + +#print avg_deg, std_deg + +keys = nodes.keys() +keys.sort() + +for n in keys: + print n, nodes[n], (nodes[n] - avg_deg)/std_deg |