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Diffstat (limited to 'structure/activity/multiplexity.py')
-rw-r--r-- | structure/activity/multiplexity.py | 41 |
1 files changed, 41 insertions, 0 deletions
diff --git a/structure/activity/multiplexity.py b/structure/activity/multiplexity.py new file mode 100644 index 0000000..9e038c9 --- /dev/null +++ b/structure/activity/multiplexity.py @@ -0,0 +1,41 @@ +#### +## +## Take as input the layers of a multiplex, and provide as output a +## file where the n-th line contains the activity of the n-th +## layer. +## +## + + +import sys + +if len(sys.argv) < 3: + print "Usage: %s <layer1> <layer2> [<layer3>...]" % sys.argv[0] + sys.exit(1) + +max_N = -1 + +layers = [] + + +for layer in sys.argv[1:]: + active = [] + with open(layer, "r") as lines: + for l in lines: + if l[0] == "#": + continue + + s, d = [int(x) for x in l.strip(" \n").split(" ")[:2]] + if s > max_N: + max_N = s + if d > max_N: + max_N = d + active.extend([s,d]) + active = set(active) + layers.append(active) + +for i in range(len(layers)): + for j in range(i+1, len(layers)): + s = layer[i] & layer[j] + print i, j, len(s)*1.0 / (max_N+1) + |