From a86962cbfd0321387c920a04188512d0de2f3036 Mon Sep 17 00:00:00 2001 From: KatolaZ Date: Mon, 19 Oct 2015 16:30:12 +0100 Subject: First commit of MAMMULT documentation --- doc/html/mammult_docsu51.html | 113 ++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 113 insertions(+) create mode 100644 doc/html/mammult_docsu51.html (limited to 'doc/html/mammult_docsu51.html') diff --git a/doc/html/mammult_docsu51.html b/doc/html/mammult_docsu51.html new file mode 100644 index 0000000..8eab351 --- /dev/null +++ b/doc/html/mammult_docsu51.html @@ -0,0 +1,113 @@ + + +2.3.1.0 tune_rho + + + + + + + + +

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tune_rho
+

NAME +

tune_rho - Construct a multiplex with prescribed inter-layer correlations. +

SYNOPSYS +

tune_rho <rank1> <rank2> <rho> <eps> <beta> [RND|NAT|INV] +

DESCRIPTION +

This programs tunes the inter-layer degree correlation coefficient ρ +(Spearman’s rank correlation) of two layers, by adjusting the inter-layer pairing +of nodes. The files rank1 and rank2 are the rankings of nodes in the first and +second layer, where the n-th line of the file contains the rank of the n-th node +(the highest ranked node has rank equal to 1). + + + +

The parameter rho is the desired value of the Spearman’s rank correlation +coefficient, while eps is the accuracy of rho. For instance, if rho is set equal to +-0.25 and eps is equal to 0.0001, the program stops when the configuration of +node pairing corresponds to a value of ρ which differs from -0.25 by less than +0.0001. +

The parameter beta is the typical inverse temperature of simulated +annealing. +

If no other parameter is specified, or if the last parameter is RND, the program +starts from a random pairing of nodes. If the last parameter is NAT then the +program assumes that the initial pairing is the natural one, where the nodes have +the same ID on both layers. Finally, if INV is specified, the initial pairing is the +inverse pairing, i.e. the one where node 0 on layer 1 is paired with node N-1 on +layer 2, and so on. +

OUTPUT +

The program prints on stdout a pairing, i.e. a list of lines in the +format: +

  IDL1 IDL2 +

where IDL1 is the ID of the node on layer 1 and IDL2 is the corresponding +ID of the same node on layer 2. +

REFERENCE +

V. Nicosia, V. Latora, “Measuring and modeling correlations in multiplex +networks”, Phys. Rev. E 92, 032805 (2015). +

Link to paper: http://journals.aps.org/pre/abstract/10.1103/PhysRevE.92.032805 + + + +

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